Filing of Company Income Tax Returns (CITR) in Nigeria is a critical legal and strategic requirement for all registered companies. It ensures compliance with the Companies Income Tax Act (CITA), strengthens corporate governance, and contributes significantly to national revenue. Despite its importance, compliance rates, particularly among small and medium enterprises (SMEs), remain suboptimal.
This comprehensive guide provides in-depth insights into filing company income tax returns in Nigeria, exploring trends, sectoral compliance, challenges, government initiatives, and practical strategies for businesses to meet their obligations.
Understanding Company Income Tax in Nigeria
What is Company Income Tax (CIT)?
Company Income Tax is a tax levied on the profits of companies operating in Nigeria. The Federal Inland Revenue Service (FIRS) is responsible for administering, collecting, and enforcing CIT. All registered companies, irrespective of size or sector, must file annual CIT returns, usually within six months after their accounting period ends.
Key aspects of CIT:
- Standard corporate tax rate: 30% of taxable profits
- Minimum tax: Applicable to companies with no taxable profits
- Filing deadline: Six months post accounting period
- Penalties: Late filing or underpayment can lead to fines, penalties, and legal action
Importance of Filing CIT Returns
Filing CIT returns provides multiple benefits:
- Legal compliance: Avoids penalties, fines, and potential lawsuits
- Transparency: Demonstrates corporate governance and accountability
- Access to financing: Banks and investors require evidence of tax compliance
- Contract eligibility: Government and corporate contracts often require tax compliance
- Economic contribution: CIT revenues fund infrastructure, healthcare, and education
Historical Trends in CIT Collection
Revenue Growth (2015–2024)
Over the past decade, Nigeria has experienced significant growth in CIT revenue.
- 2015: ₦1.2 trillion
- 2018: ₦2.4 trillion
- 2020: ₦3.8 trillion
- 2023: ₦4.89 trillion, a 73% increase from 2022 (TheCable)
- Q2 2024: ₦2.47 trillion, 150.8% quarter-on-quarter increase (TheCable)
- Q3 2024: ₦1.77 trillion, down 28.2% from Q2 (TheCable)
Analysis: Large firms account for the bulk of revenue, while fluctuations indicate delays, under-reporting, and sector-specific variations in profitability.
Growth of Taxpayer Base
FIRS has expanded its taxpayer base to enhance compliance:
- 170,000 new taxpayers registered, a 20% compliance increase (Nairametrics)
- Number of registered companies: 1.64 million (2018) → 2.044 million (2020) (OECD)
Implication: Registration growth expands potential compliance but does not guarantee actual filing. Many companies are dormant or inactive.
Compliance Challenges in Nigeria
Despite progress in registration, compliance remains a challenge, particularly for SMEs.
Filing Rates
- Only 25–28% of registered companies filed annual returns between 2012–2014 (OECD)
- SMEs: Only 4% fully compliant (iTelemedia)
Causes of Non-Compliance
- Lack of awareness about tax obligations
- Poor bookkeeping and record-keeping
- Intentional tax avoidance
- Dormant or inactive companies
Tax Evasion
Investigations show that some companies win government contracts but fail to file statutory returns (Dataphyte).
Estimated non-compliance: 25–30% of registered companies (CISLAC)
Sectoral Analysis of CIT Filing
Financial Services
- High compliance due to regulation and formal accounting practices
- FIRS closely monitors banks and insurance firms
- Example: A multinational bank in Lagos consistently filed CITRs, enhancing access to government contracts
Manufacturing & Industrial Firms
- Moderate compliance; smaller manufacturing companies often under-report profits
- Cash-based operations contribute to filing challenges
Agriculture & SMEs
- Low compliance due to informal operations and cash-based bookkeeping
- Example: An SME in Ogun State missed filing deadlines and incurred fines
Technology & Startups
- Mixed compliance; startups often lack formal accounting systems
- High incentive to comply to attract investors
Step-by-Step Guide to Filing Company Income Tax Returns
- Register for CIT with FIRS
- Prepare financial statements using accurate bookkeeping
- Calculate taxable profit considering allowable deductions
- Complete CITR Form CITA 002
- File online via FIRS e-tax portal
- Submit payment for tax due
- Retain proof of filing for audit and compliance
Deadlines: Six months after the end of accounting period
Penalties: Late filing fines and interest on underpaid tax
Practical Tips for Businesses
- Maintain accurate accounting records
- Track deadlines carefully
- Use digital filing platforms for efficiency
- Engage qualified tax professionals
- File even if profit is zero to avoid penalties
Consequences of Non-Filing
- Companies: Fines, penalties, and loss of contract eligibility
- Government: Revenue shortfall affecting public services
- Economy: Reduced investor confidence and uneven business environment
READ MORE:
2025 Capital Gains Tax: Small Investors Protected, High Earners Targeted
How Nigerian Corporates Can Legally Escape the 30% Capital Gains Tax
Federal Ministry of Finance Nigeria: Driving Economic Growth and Stability
Case Studies
Large Financial Firm
A multinational bank in Lagos uses professional accountants and digital systems to file CITRs. Result: consistent compliance, contract eligibility, and strong investor confidence.
Small Agricultural Enterprise
An SME in Ogun State struggled with cash-based bookkeeping and missed filing deadlines. Result: fines and limited access to government projects.
Lesson: Structured accounting and awareness significantly improve compliance.
Policy Recommendations
- Integrate CAC and FIRS databases for active tracking
- Publicize compliance reports to encourage accountability
- Provide SME education and support for filing
- Conduct targeted audits for high-risk sectors
- Expand digital filing solutions
Government Initiatives
- FIRS e-tax portal for online filing
- SME training programs to improve awareness
- Enhanced penalties for non-compliance
- Collaboration with banks and CAC for better monitoring
Conclusion
Filing of Company Income Tax Returns in Nigeria is both a legal duty and strategic business practice. While large firms comply consistently, SMEs lag behind, creating a compliance gap. Companies prioritizing CIT filing enjoy credibility, financing, and contract eligibility. Government initiatives and policy enforcement are essential to bridge this gap.
Consistent filing strengthens corporate governance, supports national development, and builds investor confidence, making CIT compliance critical for all companies in Nigeria.

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